Stephan Lorenz, PhD
Director – Integrated Genomics Services
Integrated Genomics Services
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Biography
Dr. Lorenz graduated in Biochemistry at the University of Leipzig, where he investigated the role of GPCR kinases in the regulation of GPCR activity. He then joined the laboratory of Prof Ralf Paschke in Leipzig for his PhD, studying calcium-binding proteins and their role in benign thyroid tumours. He joined the Single Cell Centre at the Wellcome Sanger Institute in Cambridge in 2013 to develop novel single-cell whole-genome amplification methods in the group of Thierry Voet. A year on, he started to build and manage one of the first core facilities focussed on high-throughput single-cell genome and transcriptome sequencing. He and his team developed methods to rapidly process thousands of cells per experiment using high-end automation to achieve high throughput and to minimize assay volumes and cost. He also managed teams for custom and third-generation sequencing, contributing to international projects such as the “Human Cell Atlas” and “Tree of Life”. In 2018, he joined Sidra Medical and Research as Director of the Integrated Genomics Services, where he uses his background to enable more cost-effective, rapid and robust sequencing solutions, thus supporting important initiatives like the Qatar Precision Medicine Institute, but also enabling the use of cutting-edge sequencing technologies in a clinical setting for diagnostics and Precision Medicine. In this role, he is overseeing the activities of Genomics, Omics as well as the Applied Bioinformatics Core and the Zebrafish Core Facilities, and developing new platforms for large-scale biorepositories. -
Research Interests
Next-Generation Sequencing, lab automation, process improvement -
Lab Members
Clinical Genomics LaboratoryLisa Sara MathewLead – Library PreparationEmail: lmathew (@) sidra.orgKun WangLead – SequencingEmail: kwang (@) sidra.orgMahesh Kumar Reddy KalikiriResearch Specialist - AutomationEmail: mkalikiri (@) sidra.orgLi LiuResearch Specialist – Library PreparationEmail: lliu (@) sidra.orgLi WangResearch Specialist – SequencingEmail: lwang (@) sidra.orgGuishuang WangResearch Specialist – SequencingEmail: gwang (@) sidra.orgOmics Core FacilitySara Tomei, PhDManagerEmail: stomei (@) sidra.orgMuna Al HashmiResearch Specialist – Extraction, Sample StorageEmail: mhashmi (@) sidra.orgIman Khalid Azzan Al AzwaniResearch Specialist – Long-Read Sequencing, Sanger SequencingEmail: Ialazwani (@) sidra.orgRebecca MathewResearch Specialist – Illumina Arrays, Nanostring, Fluididgm, BionanoEmail: rmathew1 (@) sidra.orgAlia Al MassihResearch Specialist – Extraction, Sample StorageEmail: aalmassih1 (@) sidra.orgGenomic Data Science GroupNajeeb SyedResearch Specialist – BioinformaticsEmail: nsyed (@) sidra.orgFazulur Rehaman VempalliResearch Specialist – BioinformaticsEmail: fvempalli (@) sidra.orgMohammed AbuhaliqaResearch Specialist – BioinformaticsEmail: mabuhaliqa (@) sidra.orgZebrafish Functional Genomics Core Facility>/b>Sahar Isa Da’as, PhDManagerEmail: sdaas (@) sidra.orgWaseem HasanResearch Specialist – ZebrafishEmail: whasan (@) sidra.orgDoua AbdelrahmanResearch Specialist – ZebrafishEmail: dabdelrahman (@) sidra.orgAhmed HaniLaboratory Assistant - ZebrafishEmail: ahani (@) sidra.org
Selected Services:
- Whole-Genome Sequencing
- Transcriptome Sequencing
- Single-Cell Sequencing
- Long-read WGS / RNA sequencing
- Genotyping and Gene Expression profiling
- Methylation profiling
- Zebrafish model generation and phenotyping